ExperimentSetReplicate

ExperimentSet4DNES9BAC4R2
released

in situ ChIA-PET in GM12878 using CTCF antibody

   September 27th, 2024 at 5:38pm
Source Publication
Multifaceted roles of cohesin in regulating transcriptional loops.
Kim M, Wang P, et al., bioRxiv : the preprint server for biology 2024

Note: Experiment items linked to 2 experiment sets (4DNES9BAC4R2, 4DNES7IB5LY9)  


This ExperimentSet contains files that are also part of 4DNES7IB5LY9.
The files 4DNFIA61WDTD and 4DNFIOZ6OJYL (of experiment 4DNEXKAMU4M6) that were originally submitted as part of 4DNES7IB5LY9 were added to this dataset and included in the analysis results.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
immortalized cells
Sample 
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: CTCF protein

2 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSKO8OQG7
Bio Replicate 1
Experiment
4DNEXQPJ45Y5
Tech Replicate 1
Pair
28.83 GB
151
  Pass
358.75m
32.2 GB
151
  Pass
358.75m