14 fewer sets in 4DN-only Data.
Included Properties
Data Type
Dataset
Sample Type
Sample Category
Sample
Organ/System
Tissue Source
Treatments
Set Type
Dataset Group
Warnings
12 Common Properties
Project
External
Lab
Wei Xie, TSINGHUA
Experiment Category
Sequencing
Experiment Type
Hi-C
Organism
Mouse
Sample Tier
Unclassified
Publication
Du Z et al. (2017) PMID:28703188
Modifications
No value
Assay Details
Enzyme: MboI
Center
External
Status
Released
Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 45 h with alpha-amanitin (100 μg/ml)
Enzyme
MboI
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 45 h
Enzyme
MboI
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 20 h with alpha-amanitin (100 μg/ml)
Enzyme
MboI
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 20 h
Enzyme
MboI
in situ Hi-C
cerebral cortex
sisHi-C during early embryonic development
Cortex
Enzyme
MboI
in situ Hi-C
R1 mESC line
sisHi-C during early embryonic development
ES cells
Enzyme
MboI
in situ Hi-C
inner cell mass
sisHi-C during early embryonic development
ICM
Enzyme
MboI
in situ Hi-C
8-cell stage embryo
sisHi-C during early embryonic development
8-cell embryos
Enzyme
MboI
in situ Hi-C
Late 2-cell stage embryo
sisHi-C during early embryonic development
Late 2-cell embryos
Enzyme
MboI
in situ Hi-C
Early 2-cell stage embryo
sisHi-C during early embryonic development
Early 2-cell embryos
Enzyme
MboI
in situ Hi-C
PN5 stage zygote
sisHi-C during early embryonic development
Zygotes in pronuclear stage 5
Enzyme
MboI
in situ Hi-C
PN3 stage zygote
sisHi-C during early embryonic development
Zygotes in pronuclear stage 3
Enzyme
MboI
in situ Hi-C
oocyte
sisHi-C during early embryonic development
Oocytes in metaphase II
Enzyme
MboI
in situ Hi-C
sperm
sisHi-C during early embryonic development
Sperm cells
Enzyme
MboI
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