Included Properties
Data Type
Sample
Organ/System
Tissue Source
Set Type
Dataset Group
17 Common Properties
Project
4DN
Lab
Jesse Dixon, SALK
Experiment Category
Sequencing
Experiment Type
Hi-C
Dataset
in situ Hi-C on maturing regulatory T cells (Treg)
Organism
Mouse
Sample Type
primary cells
Sample Tier
Unclassified
Sample Category
Primary Cells
Publication
Liu Z et al. (2023) PMID:37932264
Modifications
No value
Treatments
No value
Assay Details
Enzyme: MboI
Center
OFHHD - Dixon
Status
Released
Commendations
No value
Warnings
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
Treg - spleen - Foxp3+
in situ Hi-C on maturing regulatory T cells (Treg)
Mature Treg (spleen)
Enzyme
MboI
in situ Hi-C
Tcon - spleen Foxp3-
in situ Hi-C on maturing regulatory T cells (Treg)
TCon (conventional T-cells, spleen)
Enzyme
MboI
in situ Hi-C
double-positive, alpha-beta thymocyte
in situ Hi-C on maturing regulatory T cells (Treg)
CD4+ CD8+ double positive
Enzyme
MboI
in situ Hi-C
double-negative alpha beta thymocyte
in situ Hi-C on maturing regulatory T cells (Treg)
CD4- CD8- double negative
Enzyme
MboI
in situ Hi-C
CD8-positive, alpha-beta thymocyte
in situ Hi-C on maturing regulatory T cells (Treg)
CD8+ Single positive
Enzyme
MboI
in situ Hi-C
CD4-positive, alpha-beta thymocyte
in situ Hi-C on maturing regulatory T cells (Treg)
CD4+ Single positive
Enzyme
MboI
in situ Hi-C
Treg precursor - CD25+ Foxp3-
in situ Hi-C on maturing regulatory T cells (Treg)
CD25+ Treg precursor
Enzyme
MboI
in situ Hi-C
Treg precursor - CD25+ Foxp3-low
in situ Hi-C on maturing regulatory T cells (Treg)
Foxp3-low Treg precursor
Enzyme
MboI
in situ Hi-C
Treg Precursor cell
in situ Hi-C on maturing regulatory T cells (Treg)
Foxp3 Treg precursor
Enzyme
MboI
- fin -